Yale SARS-CoV-2 Genomic Surveillance Initiative
In collaboration with public health agencies and diagnostic labs across Connecticut, we established a routine SARS-CoV-2 genomic surveillance system to track emerging variants.
Genomic epidemiology to track SARS-CoV-2
Yale School of Public Health
The Grubaugh Lab is located within the Yale School of Public Health, Department of Epidemiology of Microbial Diseases. Our department uniquely combines clinical, computational, and laboratory-based approaches to combat infectious diseases around the world.read more about our department
Novel methods to detect oubreaks
Rapid data sharing using Nextstrain
Nextstrain is an open-source project created by Trevor Bedford and Richer Neher to harness the scientific and public health potential of pathogen genome data. We recently teamed up with the Nextstrain team, including James Hadfield, to create a portal to visualize West Nile virus spread and evolution during the last 20 years in North America. We also create “community” pages to share ongoing data analysis with our collaborators and the public.see Nextstrain in action